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  5. LOC_Os10g29400

LOC_Os10g29400


Description : transposon protein, putative, CACTA, En/Spm sub-class, expressed


Gene families : OG_42_0000395 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g29400
Cluster HCCA clusters: cluster_0002

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14517 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi2g19415 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi2g22446 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi4g16075 No alias Function unknown 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 556 721
IPR024752 Myb/SANT-like_dom 118 212
No external refs found!