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  5. Solyc08g081730

Solyc08g081730


Description : Reticulon-like protein (AHRD V3.3 *** K4CPG9_SOLLC)


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc08g081730
Cluster HCCA clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
At2g15280 No alias Reticulon-like protein B10... 0.02 Orthogroups_2024-Update
Bradi1g40150 No alias VIRB2-interacting protein 2 0.04 Orthogroups_2024-Update
Brara.K00705.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Cre16.g689087 No alias VIRB2-interacting protein 1 0.02 Orthogroups_2024-Update
Glyma.09G253600 No alias Reticulon family protein 0.02 Orthogroups_2024-Update
LOC_Os04g57420 No alias reticulon domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00019419-RA No alias (at3g10260 : 207.0) Reticulon family protein; CONTAINS... 0.02 Orthogroups_2024-Update
PSME_00026571-RA No alias (at3g10260 : 227.0) Reticulon family protein; CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00033509-RA No alias (at3g10260 : 192.0) Reticulon family protein; CONTAINS... 0.02 Orthogroups_2024-Update
Potri.001G097700 No alias Reticulan like protein B3 0.03 Orthogroups_2024-Update
Seita.3G157600.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Sobic.006G259900.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Solyc03g119190 No alias Reticulon-like protein (AHRD V3.3 *** K4BM68_SOLLC) 0.03 Orthogroups_2024-Update
Sopen08g030030 No alias Reticulon 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004871 obsolete signal transducer activity IEP Predicted GO
MF GO:0005342 organic acid transmembrane transporter activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015171 amino acid transmembrane transporter activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 85 240
No external refs found!