- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : retrotransposon protein, putative, unclassified, expressed
Gene families : OG_42_0004846 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004846_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os10g31670 | |
| Cluster | HCCA clusters: cluster_0030 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | Predicted GO |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Predicted GO |
| MF | GO:0004568 | chitinase activity | IEP | Predicted GO |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Predicted GO |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Predicted GO |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Predicted GO |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Predicted GO |
| BP | GO:0006030 | chitin metabolic process | IEP | Predicted GO |
| BP | GO:0006032 | chitin catabolic process | IEP | Predicted GO |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Predicted GO |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0007029 | endoplasmic reticulum organization | IEP | Predicted GO |
| BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
| MF | GO:0008061 | chitin binding | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Predicted GO |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| BP | GO:0042737 | drug catabolic process | IEP | Predicted GO |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Predicted GO |
| CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Predicted GO |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Predicted GO |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |