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  5. LOC_Os10g31910

LOC_Os10g31910


Description : pectate lyase precursor, putative, expressed


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g31910
Cluster HCCA clusters: cluster_0003

Target Alias Description ECC score Gene Family Method Actions
A4A49_35525 No alias putative pectate lyase 16 0.02 Orthogroups_2024-Update
At1g04680 No alias Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A178W464] 0.03 Orthogroups_2024-Update
At3g01270 No alias Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q08A70] 0.02 Orthogroups_2024-Update
Brara.B00588.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update
Brara.I00410.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update
Brara.I04991.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Glyma.04G173900 No alias Pectate lyase family protein 0.02 Orthogroups_2024-Update
Glyma.13G145900 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G011200 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
PSME_00017512-RA No alias (at4g24780 : 545.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00019558-RA No alias (at4g13710 : 625.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00020308-RA No alias (at4g13710 : 598.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00030878-RA No alias (at5g48900 : 447.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00032290-RA No alias (at4g24780 : 602.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00041064-RA No alias (at1g67750 : 595.0) Pectate lyase family protein;... 0.02 Orthogroups_2024-Update
PSME_00046555-RA No alias (at4g24780 : 518.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Potri.011G093400 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.7G017900.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002022 Pec_lyase 157 338
No external refs found!