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  5. LOC_Os10g32920

LOC_Os10g32920


Description : ribosomal protein, putative, expressed


Gene families : OG_42_0001290 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g32920
Cluster HCCA clusters: cluster_0043

Target Alias Description ECC score Gene Family Method Actions
165708 No alias Ribosomal protein L14p/L23e family protein 0.02 Orthogroups_2024-Update
A4A49_26558 No alias 60s ribosomal protein l23 0.03 Orthogroups_2024-Update
Bradi3g55140 No alias Ribosomal protein L14p/L23e family protein 0.03 Orthogroups_2024-Update
Cre04.g211800 No alias Ribosomal protein L14p/L23e family protein 0.03 Orthogroups_2024-Update
GRMZM2G123495 No alias Ribosomal protein L14p/L23e family protein 0.03 Orthogroups_2024-Update
Glyma.03G166700 No alias Ribosomal protein L14p/L23e family protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G083840.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Pp1s114_79V6 No alias 60s ribosomal protein l23 0.03 Orthogroups_2024-Update
Pp1s15_152V6 No alias 60s ribosomal protein l23 0.01 Orthogroups_2024-Update
Sobic.004G342400.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Solyc09g072870 No alias 50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR) 0.03 Orthogroups_2024-Update
Solyc09g090610 No alias 50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR) 0.02 Orthogroups_2024-Update
Sopen06g035190 No alias Ribosomal protein L14p/L23e 0.02 Orthogroups_2024-Update
Sopen09g033550 No alias Ribosomal protein L14p/L23e 0.03 Orthogroups_2024-Update
evm.model.contig_548.2 No alias (at3g04400 : 225.0) embryo defective 2171 (emb2171);... 0.02 Orthogroups_2024-Update
evm.model.tig00021290.9 No alias (at3g04400 : 253.0) embryo defective 2171 (emb2171);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR000218 Ribosomal_L14P 22 140
No external refs found!