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  5. Solyc08g082060

Solyc08g082060


Description : Trichome birefringence-like protein (AHRD V3.3 *** A0A072TUJ8_MEDTR)


Gene families : OG_42_0000195 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g082060
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G229800 No alias TRICHOME BIREFRINGENCE-LIKE 19 0.04 Orthogroups_2024-Update
Pp1s106_209V6 No alias F6F3.23; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s1_76V6 No alias F6F3.23; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.3G077200.1 No alias mannan O-acetyltransferase *(MOAT) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 138 429
IPR025846 PMR5_N_dom 85 137
No external refs found!