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  5. LOC_Os10g35440

LOC_Os10g35440


Description : pentatricopeptide repeat domain containing protein, putative, expressed


Gene families : OG_42_0000929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g35440
Cluster HCCA clusters: cluster_0034

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14190 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Sobic.005G026500.2 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 194 243
IPR002885 Pentatricopeptide_repeat 83 104
IPR002885 Pentatricopeptide_repeat 153 184
No external refs found!