1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g090240

Solyc01g090240


Description : AvrPto-dependent Pto-interacting protein 3


Gene families : OG_42_0000089 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g090240
Cluster HCCA clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
A4A49_62868 No alias serinethreonine-protein kinase d6pkl2 0.03 Orthogroups_2024-Update
Brara.B01300.1 No alias AGC-VIII protein kinase & EC_2.7 transferase... 0.04 Orthogroups_2024-Update
Brara.D02104.1 No alias regulatory protein kinase *(PINOID) of auxin transport &... 0.02 Orthogroups_2024-Update
Brara.F03518.1 No alias AGC-VIII protein kinase & EC_2.7 transferase... 0.03 Orthogroups_2024-Update
Glyma.03G193000 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G035610.4 No alias AGC-VIII protein kinase & EC_2.7 transferase... 0.02 Orthogroups_2024-Update
HORVU7Hr1G043790.5 No alias AGC-VIII protein kinase & EC_2.7 transferase... 0.02 Orthogroups_2024-Update
LOC_Os06g18830 No alias AGC_PVPK_like_kin82y.13 - ACG kinases include homologs... 0.02 Orthogroups_2024-Update
PSME_00054881-RA No alias (at3g20830 : 279.0) AGC (cAMP-dependent, cGMP-dependent... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 537 640
IPR000719 Prot_kinase_dom 309 457
No external refs found!