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  5. LOC_Os10g36530

LOC_Os10g36530


Description : mutS domain V family protein, expressed


Gene families : OG_42_0003122 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003122_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g36530
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
Bradi3g30757 No alias DNA mismatch repair protein MutS, type 2 0.05 Orthogroups_2024-Update
Bradi5g26420 No alias DNA mismatch repair protein MutS, type 2 0.03 Orthogroups_2024-Update
Glyma.07G195700 No alias DNA mismatch repair protein MutS, type 2 0.03 Orthogroups_2024-Update
Kfl00158_0160 kfl00158_0160_v1.1 (at5g54090 : 294.0) DNA mismatch repair protein MutS,... 0.02 Orthogroups_2024-Update
Mp2g11550.1 No alias DNA mismatch repair protein MSH1, mitochondrial... 0.01 Orthogroups_2024-Update
PSME_00011263-RA No alias (at1g65070 : 535.0) DNA mismatch repair protein MutS,... 0.02 Orthogroups_2024-Update
Sobic.001G198400.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G270200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
evm.model.tig00020629.149 No alias (at1g65070 : 234.0) DNA mismatch repair protein MutS,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006298 mismatch repair IEA InterProScan predictions
MF GO:0030983 mismatched DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000432 DNA_mismatch_repair_MutS_C 326 517
No external refs found!