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  5. LOC_Os10g38000

LOC_Os10g38000


Description : dehydration-responsive element-binding protein, putative, expressed


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g38000
Cluster HCCA clusters: cluster_0049

Target Alias Description ECC score Gene Family Method Actions
A4A49_18156 No alias ethylene-responsive transcription factor shine 3 0.03 Orthogroups_2024-Update
A4A49_36835 No alias ethylene-responsive transcription factor 5 0.02 Orthogroups_2024-Update
Bradi2g50035 No alias ethylene responsive element binding factor 2 0.03 Orthogroups_2024-Update
Brara.B02236.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Brara.F00821.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G076896 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G236800 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Glyma.05G228100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G018200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G018240.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
HORVU0Hr1G030500.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G082310.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G090250.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G062940.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g58420 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g46410 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_121581g0010 No alias (at1g22190 : 103.0) Integrase-type DNA-binding... 0.02 Orthogroups_2024-Update
Mp5g06970.1 No alias transcription factor (ERF) 0.02 Orthogroups_2024-Update
PSME_00056631-RA No alias (at5g21960 : 125.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Pp1s127_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s132_34V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s133_11V6 No alias c-repeat binding factor 4 0.02 Orthogroups_2024-Update
Pp1s14_196V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s155_21V6 No alias transcriptional factor 0.01 Orthogroups_2024-Update
Pp1s187_47V6 No alias dna binding 0.03 Orthogroups_2024-Update
Pp1s296_32V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s41_212V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G187900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G188000.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Seita.2G364700.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
Sobic.006G167900.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G184700.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G210300.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G259000.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G077001.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G077100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G077200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G111200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g118190 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Solyc07g064890 No alias Ethylene Response Factor F.2 0.03 Orthogroups_2024-Update
Solyc10g080310 No alias Dehydration responsive element binding transcription... 0.03 Orthogroups_2024-Update
Sopen01g036330 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen06g033990 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 34 83
No external refs found!