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  5. Solyc08g082510

Solyc08g082510


Description : LOW QUALITY:F-box protein (AHRD V3.3 *** W9RW78_9ROSA)


Gene families : OG_42_0000263 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g082510
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Bradi4g14891 No alias F-box family protein with a domain of unknown function (DUF295) 0.02 Orthogroups_2024-Update
LOC_Os01g22480 No alias OsFBDUF4 - F-box and DUF domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g36830 No alias expressed protein 0.03 Orthogroups_2024-Update
Seita.3G248400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g112780 No alias LOW QUALITY:F-box family protein (AHRD V3.3 *-* B9H429_POPTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR005174 DUF295 287 342
No external refs found!