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  5. LOC_Os10g39440

LOC_Os10g39440


Description : transporter family protein, putative, expressed


Gene families : OG_42_0001276 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g39440
Cluster HCCA clusters: cluster_0135

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G012923 No alias tonoplast monosaccharide transporter2 0.02 Orthogroups_2024-Update
Glyma.14G000900 No alias tonoplast monosaccharide transporter2 0.03 Orthogroups_2024-Update
Potri.002G006200 No alias tonoplast monosaccharide transporter2 0.02 Orthogroups_2024-Update
Sopen01g054330 No alias Sugar (and other) transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 507 730
IPR005828 MFS_sugar_transport-like 7 225
No external refs found!