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  5. Solyc08g082610

Solyc08g082610


Description : DCD (Development and Cell Death) domain protein (AHRD V3.3 *** AT5G42050.1)


Gene families : OG_42_0000361 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000361_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc08g082610
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Bradi2g04040 No alias Function unknown 0.02 Orthogroups_2024-Update
GRMZM2G011923 No alias DCD (Development and Cell Death) domain protein 0.04 Orthogroups_2024-Update
GRMZM2G033117 No alias DCD (Development and Cell Death) domain protein 0.03 Orthogroups_2024-Update
GRMZM2G061492 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.04G122400 No alias DCD (Development and Cell Death) domain protein 0.02 Orthogroups_2024-Update
Glyma.06G309600 No alias DCD (Development and Cell Death) domain protein 0.03 Orthogroups_2024-Update
Kfl00060_0310 kfl00060_0310_v1.1 (p37707|b2_dauca : 119.0) B2 protein - Daucus carota... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 196 330
No external refs found!