LOC_Os10g41550

Description : beta-amylase, putative, expressed

Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os10g41550
Cluster	HCCA clusters: cluster_0044

Target	Alias	Description	ECC score	Gene Family Method
A4A49_00149	No alias	beta-amylase 2, chloroplastic	0.03	Orthogroups_2024-Update
A4A49_35845	No alias	beta-amylase 1, chloroplastic	0.03	Orthogroups_2024-Update
A4A49_37406	No alias	inactive beta-amylase 9	0.04	Orthogroups_2024-Update
At5g18670	No alias	Inactive beta-amylase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYW2]	0.02	Orthogroups_2024-Update
Bradi1g25440	No alias	beta-amylase 5	0.02	Orthogroups_2024-Update
Bradi1g75610	No alias	beta-amylase 1	0.03	Orthogroups_2024-Update
Brara.E01137.1	No alias	EC_3.2 glycosylase & beta amylase	0.02	Orthogroups_2024-Update
GRMZM2G007939	No alias	chloroplast beta-amylase	0.03	Orthogroups_2024-Update
GRMZM2G058310	No alias	beta-amylase 5	0.02	Orthogroups_2024-Update
Glyma.06G301500	No alias	beta-amylase 5	0.02	Orthogroups_2024-Update
Glyma.09G260100	No alias	beta-amylase 7	0.02	Orthogroups_2024-Update
Glyma.13G215000	No alias	beta-amylase 3	0.04	Orthogroups_2024-Update
Glyma.15G098100	No alias	beta-amylase 3	0.04	Orthogroups_2024-Update
Glyma.17G150100	No alias	chloroplast beta-amylase	0.04	Orthogroups_2024-Update
HORVU1Hr1G055140.1	No alias	beta amylase & EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
Kfl00034_0040	kfl00034_0040_v1.1	(at3g23920 : 514.0) Encodes a chloroplast beta-amylase....	0.02	Orthogroups_2024-Update
MA_10432251g0010	No alias	(at4g00490 : 572.0) Encodes a chloroplast beta-amylase....	0.03	Orthogroups_2024-Update
Sobic.002G136200.2	No alias	beta amylase & EC_3.2 glycosylase & BZR-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G329500.1	No alias	EC_3.2 glycosylase & beta amylase	0.02	Orthogroups_2024-Update
Sopen08g026110	No alias	Glycosyl hydrolase family 14	0.02	Orthogroups_2024-Update
Sopen09g034010	No alias	Glycosyl hydrolase family 14	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEA	InterProScan predictions
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:0001871	pattern binding	IEP	Predicted GO
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predicted GO
MF	GO:0004618	phosphoglycerate kinase activity	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
BP	GO:0006721	terpenoid metabolic process	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Predicted GO
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predicted GO
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	IEP	Predicted GO
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
MF	GO:0019900	kinase binding	IEP	Predicted GO
MF	GO:0019901	protein kinase binding	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
BP	GO:0042325	regulation of phosphorylation	IEP	Predicted GO
BP	GO:0043549	regulation of kinase activity	IEP	Predicted GO
BP	GO:0045859	regulation of protein kinase activity	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051338	regulation of transferase activity	IEP	Predicted GO
BP	GO:0065009	regulation of molecular function	IEP	Predicted GO
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	85	499

External Links

No external refs found!

LOC_Os10g41550

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation