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  5. LOC_Os10g41740

LOC_Os10g41740


Description : pentatricopeptide, putative, expressed


Gene families : OG_42_0004020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g41740
Cluster HCCA clusters: cluster_0002


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0030964 NADH dehydrogenase complex IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045271 respiratory chain complex I IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 393 442
IPR002885 Pentatricopeptide_repeat 290 338
IPR002885 Pentatricopeptide_repeat 234 257
IPR002885 Pentatricopeptide_repeat 366 386
No external refs found!