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LOC_Os10g42800


Description : AMP-binding enzyme, putative, expressed


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g42800
Cluster HCCA clusters: cluster_0125

Target Alias Description ECC score Gene Family Method Actions
Brara.H02327.1 No alias OPC-8 0.02 Orthogroups_2024-Update
Glyma.11G010500 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
Seita.9G184000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G500800.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 470 544
IPR000873 AMP-dep_Synth/Lig 61 460
No external refs found!