Description : Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA)
Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc08g082910 | |
Cluster | HCCA clusters: Cluster_132 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_33562 | No alias | dof zinc finger protein dof4.6 | 0.04 | Orthogroups_2024-Update | |
Bradi1g15420 | No alias | Dof-type zinc finger DNA-binding family protein | 0.03 | Orthogroups_2024-Update | |
Bradi2g09720 | No alias | cycling DOF factor 2 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G146283 | No alias | TARGET OF MONOPTEROS 6 | 0.02 | Orthogroups_2024-Update | |
Glyma.07G053900 | No alias | Dof-type zinc finger DNA-binding family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G352000 | No alias | DOF zinc finger protein 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.19G118000 | No alias | cycling DOF factor 3 | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g48290 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os03g55610 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.04 | Orthogroups_2024-Update | |
LOC_Os08g38220 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_83624g0010 | No alias | (at5g60200 : 114.0) Encodes a Dof-type transcription... | 0.04 | Orthogroups_2024-Update | |
MA_97259g0020 | No alias | (at5g62430 : 134.0) Dof-type zinc finger... | 0.04 | Orthogroups_2024-Update | |
PSME_00040668-RA | No alias | (at5g02460 : 137.0) Dof-type zinc finger DNA-binding... | 0.03 | Orthogroups_2024-Update | |
PSME_00052342-RA | No alias | (at5g62940 : 135.0) HCA2 induces the formation of... | 0.03 | Orthogroups_2024-Update | |
Potri.005G149100 | No alias | Dof-type zinc finger DNA-binding family protein | 0.02 | Orthogroups_2024-Update | |
Sobic.001G034300.3 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Sobic.002G236600.2 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Sobic.004G266200.1 | No alias | transcription factor *(DOF) | 0.04 | Orthogroups_2024-Update | |
Solyc04g070960 | No alias | Dof zinc finger protein (AHRD V3.3 *-* W9S6D3_9ROSA) | 0.03 | Orthogroups_2024-Update | |
Sopen00g011530 | No alias | Dof domain, zinc finger | 0.02 | Orthogroups_2024-Update | |
Sopen01g039850 | No alias | Dof domain, zinc finger | 0.02 | Orthogroups_2024-Update | |
Sopen02g021750 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update | |
Sopen02g022790 | No alias | Dof domain, zinc finger | 0.02 | Orthogroups_2024-Update | |
Sopen02g023480 | No alias | Dof domain, zinc finger | 0.02 | Orthogroups_2024-Update | |
Sopen06g022000 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Predicted GO |
CC | GO:0005666 | RNA polymerase III complex | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
BP | GO:0006383 | transcription by RNA polymerase III | IEP | Predicted GO |
BP | GO:0006570 | tyrosine metabolic process | IEP | Predicted GO |
BP | GO:0006571 | tyrosine biosynthetic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Predicted GO |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Predicted GO |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Predicted GO |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Predicted GO |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
CC | GO:0030880 | RNA polymerase complex | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Predicted GO |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Predicted GO |
MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Predicted GO |
CC | GO:1990234 | transferase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 39 | 96 |
No external refs found! |