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  5. LOC_Os11g01480

LOC_Os11g01480


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g01480
Cluster HCCA clusters: cluster_0083

Target Alias Description ECC score Gene Family Method Actions
405704 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
438636 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
442062 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
A4A49_12162 No alias protein phosphate starvation response 1 0.03 Orthogroups_2024-Update
A4A49_41088 No alias myb family transcription factor phl5 0.02 Orthogroups_2024-Update
At2g42660 No alias At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0] 0.03 Orthogroups_2024-Update
Bradi1g07511 No alias Homeodomain-like superfamily protein 0.01 Orthogroups_2024-Update
Bradi1g32370 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g52500 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g20520 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.A00897.1 No alias KANADI-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E00559.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Brara.F03438.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Brara.G02892.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Brara.H02156.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Brara.J01739.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G069525 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G175827 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G370425 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G035700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G153900 No alias myb-like HTH transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Glyma.08G305000 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.11G183400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G089100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G079000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G083600 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Glyma.19G146600 No alias myb-like HTH transcriptional regulator family protein 0.01 Orthogroups_2024-Update
HORVU2Hr1G045770.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G097900.21 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G070420.7 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g36229 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os05g40960 No alias Myb transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_138039g0010 No alias (at1g32240 : 147.0) Encodes a member of the KANADI... 0.02 Orthogroups_2024-Update
MA_1432g0010 No alias (at3g13040 : 86.3) myb-like HTH transcriptional... 0.03 Orthogroups_2024-Update
MA_52379g0010 No alias (at2g40260 : 115.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
MA_84935g0010 No alias (at1g14600 : 113.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 Orthogroups_2024-Update
PSME_00007590-RA No alias (at2g38300 : 112.0) myb-like HTH transcriptional... 0.02 Orthogroups_2024-Update
PSME_00043566-RA No alias (at3g04030 : 229.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.001G137600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G280000 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Potri.005G205900 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Potri.006G000800 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Potri.008G142000 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G031600 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Potri.016G117000 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Pp1s112_141V6 No alias transfactor-like protein 0.02 Orthogroups_2024-Update
Pp1s37_226V6 No alias F18A5.30; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s490_9V6 No alias myb-cc type transfactor 0.03 Orthogroups_2024-Update
Pp1s68_240V6 No alias myb-cc type transfactor 0.02 Orthogroups_2024-Update
Pp1s68_248V6 No alias myb transcription factor 0.03 Orthogroups_2024-Update
Pp1s73_118V6 No alias No description available 0.04 Orthogroups_2024-Update
Seita.8G019800.1 No alias transcription factor *(CLAUSA) 0.05 Orthogroups_2024-Update
Solyc03g006150 No alias LOW QUALITY:MYB-like transcription factor family protein... 0.03 Orthogroups_2024-Update
Solyc04g050070 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc04g079600 No alias Homeodomain-like superfamily protein (AHRD V3.3 *** AT5G42630.1) 0.02 Orthogroups_2024-Update
Solyc09g005030 No alias Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1) 0.03 Orthogroups_2024-Update
Sopen12g008150 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048580 regulation of post-embryonic development IEP Predicted GO
BP GO:0048582 positive regulation of post-embryonic development IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050793 regulation of developmental process IEP Predicted GO
BP GO:0051094 positive regulation of developmental process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051239 regulation of multicellular organismal process IEP Predicted GO
BP GO:0051240 positive regulation of multicellular organismal process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000026 regulation of multicellular organismal development IEP Predicted GO
BP GO:2000038 regulation of stomatal complex development IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2000123 positive regulation of stomatal complex development IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 63 113
No external refs found!