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  5. LOC_Os11g01570

LOC_Os11g01570


Description : PMR5, putative, expressed


Gene families : OG_42_0003177 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003177_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g01570
Cluster HCCA clusters: cluster_0076

Target Alias Description ECC score Gene Family Method Actions
Bradi4g44860 No alias TRICHOME BIREFRINGENCE-LIKE 34 0.02 Orthogroups_2024-Update
Glyma.07G155600 No alias TRICHOME BIREFRINGENCE-LIKE 34 0.02 Orthogroups_2024-Update
Seita.7G331100.1 No alias xylan O-acetyltransferase *(XOAT) 0.02 Orthogroups_2024-Update
Seita.9G037100.1 No alias xylan O-acetyltransferase *(XOAT) 0.03 Orthogroups_2024-Update
Sobic.005G005100.1 No alias xylan O-acetyltransferase *(XOAT) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
CC GO:0019008 molybdopterin synthase complex IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 151 205
IPR026057 PC-Esterase 206 498
No external refs found!