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  5. LOC_Os11g02320

LOC_Os11g02320


Description : nucleotidyltransferase, putative, expressed


Gene families : OG_42_0000882 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g02320
Cluster HCCA clusters: cluster_0087

Target Alias Description ECC score Gene Family Method Actions
A4A49_36428 No alias hypothetical protein 0.02 Orthogroups_2024-Update
At3g61690 No alias Nucleotidyltransferase [Source:UniProtKB/TrEMBL;Acc:F4JFF2] 0.02 Orthogroups_2024-Update
Brara.E00175.1 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) 0.02 Orthogroups_2024-Update
Brara.I04257.1 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) 0.02 Orthogroups_2024-Update
GRMZM2G011608 No alias PAP/OAS1 substrate-binding domain superfamily 0.02 Orthogroups_2024-Update
Glyma.07G056700 No alias nucleotidyltransferases 0.02 Orthogroups_2024-Update
Glyma.14G203800 No alias PAP/OAS1 substrate-binding domain superfamily 0.04 Orthogroups_2024-Update
LOC_Os12g18530 No alias nucleotidyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s123_157V6 No alias T2P4.13; nucleotidyltransferase family protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030289 protein phosphatase 4 complex IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002058 PAP_assoc 227 313
No external refs found!