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  5. LOC_Os11g02670

LOC_Os11g02670


Description : zinc finger, C3HC4 type domain containing protein, expressed


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g02670
Cluster HCCA clusters: cluster_0024

Target Alias Description ECC score Gene Family Method Actions
Brara.C03763.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os12g04090 No alias zinc finger, C3HC4 type domain containing protein 0.03 Orthogroups_2024-Update
Seita.8G172700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G172800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 326 367
No external refs found!