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  5. LOC_Os11g02950

LOC_Os11g02950


Description : auxin efflux carrier component, putative, expressed


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os11g02950
Cluster HCCA clusters: cluster_0100

Target Alias Description ECC score Gene Family Method Actions
Brara.G03257.1 No alias auxin transporter *(PIN) & auxin efflux transporter *(PIN) 0.03 Orthogroups_2024-Update
Glyma.07G164600 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Solyc10g078370 No alias Auxin Efflux Facilitator 9 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 21 299
IPR004776 Mem_trans 365 548
No external refs found!