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  5. LOC_Os11g06680

LOC_Os11g06680


Description : expressed protein


Gene families : OG_42_0005415 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g06680
Cluster HCCA clusters: cluster_0083

Target Alias Description ECC score Gene Family Method Actions
Bradi4g24700 No alias Putative endonuclease or glycosyl hydrolase 0.04 Orthogroups_2024-Update
Brara.B03904.1 No alias endoribonuclease *(MNU) 0.06 Orthogroups_2024-Update
Brara.J02359.1 No alias endoribonuclease *(MNU) 0.04 Orthogroups_2024-Update
Glyma.17G127700 No alias Putative endonuclease or glycosyl hydrolase 0.05 Orthogroups_2024-Update
Seita.7G293500.1 No alias endoribonuclease *(MNU) 0.03 Orthogroups_2024-Update
Sobic.008G047500.1 No alias endoribonuclease *(MNU) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR021139 NYN_limkain-b1 58 193
No external refs found!