1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g06740

LOC_Os11g06740


Description : syntaxin 6, putative, expressed


Gene families : OG_42_0003206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003206_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g06740
Cluster HCCA clusters: cluster_0137

Target Alias Description ECC score Gene Family Method Actions
Pp1s55_214V6 No alias Qc-SNARE, SYP6/Tlg1p/Syntaxin 6 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0048193 Golgi vesicle transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
InterPro domains Description Start Stop
IPR015260 Syntaxin-6_N 6 98
IPR000727 T_SNARE_dom 187 231
No external refs found!