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  5. LOC_Os11g10910

LOC_Os11g10910


Description : chloroplast nucleoid DNA-binding protein, putative, expressed


Gene families : OG_42_0000019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g10910
Cluster HCCA clusters: cluster_0120

Target Alias Description ECC score Gene Family Method Actions
At3g18490 No alias Protein ASPARTIC PROTEASE IN GUARD CELL 1... 0.02 Orthogroups_2024-Update
GRMZM2G144464 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
Glyma.10G288100 No alias Eukaryotic aspartyl protease family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G045090.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.03 Orthogroups_2024-Update
HORVU7Hr1G109730.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.03 Orthogroups_2024-Update
LOC_Os07g34850 No alias aspartic proteinase nepenthesin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g27910 No alias aspartic proteinase nepenthesin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_15755g0010 No alias (at2g03200 : 357.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00014939-RA No alias (at5g10770 : 306.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
Potri.019G054900 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Seita.2G249100.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
Solyc05g056450 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
InterPro domains Description Start Stop
IPR032799 TAXi_C 278 421
IPR032861 TAXi_N 82 244
No external refs found!