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  5. LOC_Os11g11340

LOC_Os11g11340


Description : CIP111, putative, expressed


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g11340
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
Bradi4g22080 No alias Cam interacting protein 111 0.02 Orthogroups_2024-Update
Cre09.g398550 No alias cell division cycle 48C 0.02 Orthogroups_2024-Update
GRMZM2G036765 No alias ATPase, AAA-type, CDC48 protein 0.03 Orthogroups_2024-Update
GRMZM2G315264 No alias Cam interacting protein 111 0.03 Orthogroups_2024-Update
Glyma.08G186800 No alias cell division cycle 48C 0.03 Orthogroups_2024-Update
Glyma.12G177100 No alias ATPase, AAA-type, CDC48 protein 0.03 Orthogroups_2024-Update
Pp1s19_358V6 No alias nuclear vcp-like 0.02 Orthogroups_2024-Update
Pp1s99_139V6 No alias transitional endoplasmic reticulum 0.02 Orthogroups_2024-Update
evm.model.tig00000525.10 No alias (at3g01610 : 444.0) AAA-type ATPase - Over 90%... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 441 570
IPR003959 ATPase_AAA_core 769 899
No external refs found!