Description : ribosomal protein, putative, expressed
Gene families : OG_42_0001900 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001900_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os11g11390 | |
Cluster | HCCA clusters: cluster_0083 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Seita.1G023800.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.001G177800.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Predicted GO |
BP | GO:0006090 | pyruvate metabolic process | IEP | Predicted GO |
BP | GO:0006096 | glycolytic process | IEP | Predicted GO |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006757 | ATP generation from ADP | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008443 | phosphofructokinase activity | IEP | Predicted GO |
BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009166 | nucleotide catabolic process | IEP | Predicted GO |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Predicted GO |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015693 | magnesium ion transport | IEP | Predicted GO |
MF | GO:0019200 | carbohydrate kinase activity | IEP | Predicted GO |
BP | GO:0042866 | pyruvate biosynthetic process | IEP | Predicted GO |
BP | GO:0046031 | ADP metabolic process | IEP | Predicted GO |
BP | GO:0046939 | nucleotide phosphorylation | IEP | Predicted GO |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Predicted GO |
BP | GO:0070838 | divalent metal ion transport | IEP | Predicted GO |
BP | GO:0072511 | divalent inorganic cation transport | IEP | Predicted GO |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Predicted GO |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016180 | Ribosomal_L10e/L16 | 12 | 166 |
No external refs found! |