LOC_Os11g12040

Description : disease resistance protein RPM1, putative, expressed

Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os11g12040
Cluster	HCCA clusters: cluster_0140

Target	Alias	Description	ECC score	Gene Family Method
Brara.C04087.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Glyma.18G084400	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.18G088000	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Glyma.18G093267	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
HORVU7Hr1G008160.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU7Hr1G097880.8	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.2G062100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.4G244000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.003G313700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.005G095000.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sopen04g004380	No alias	NB-ARC domain	0.02	Orthogroups_2024-Update
Sopen04g013450	No alias	NB-ARC domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Predicted GO
MF	GO:0003690	double-stranded DNA binding	IEP	Predicted GO
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0004177	aminopeptidase activity	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	86	324

External Links

No external refs found!