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  5. Solyc09g005520

Solyc09g005520


Description : LOW QUALITY:F-box family protein, putative (AHRD V3.3 *-* A0A061GHK4_THECC)


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g005520
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
A4A49_14296 No alias f-boxkelch-repeat protein 0.02 Orthogroups_2024-Update
A4A49_27107 No alias f-box protein 0.03 Orthogroups_2024-Update
A4A49_39883 No alias f-boxkelch-repeat protein 0.04 Orthogroups_2024-Update
Glyma.01G232700 No alias F-box family protein 0.03 Orthogroups_2024-Update
Glyma.08G260800 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Glyma.08G352700 No alias F-box family protein 0.04 Orthogroups_2024-Update
Glyma.15G101600 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Glyma.17G162200 No alias F-box family protein 0.03 Orthogroups_2024-Update
Glyma.18G160600 No alias F-box and associated interaction domains-containing protein 0.04 Orthogroups_2024-Update
Glyma.18G168400 No alias F-box and associated interaction domains-containing protein 0.04 Orthogroups_2024-Update
Potri.001G262900 No alias F-box family protein 0.03 Orthogroups_2024-Update
Potri.006G010800 No alias F-box associated ubiquitination effector family protein 0.03 Orthogroups_2024-Update
Potri.006G025500 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.015G019300 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Solyc05g007370 No alias No description available 0.03 Orthogroups_2024-Update
Sopen07g026190 No alias F-box associated 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 96 134
No external refs found!