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  5. LOC_Os11g12300

LOC_Os11g12300


Description : NBS-LRR disease resistance protein, putative, expressed


Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g12300
Cluster HCCA clusters: cluster_0102

Target Alias Description ECC score Gene Family Method Actions
A4A49_41267 No alias disease resistance protein rpp13 0.03 Orthogroups_2024-Update
GRMZM2G050959 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.08G328800 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.12G011700 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.18G087800 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.20G041300 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Glyma.U008900 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G001490.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G008210.5 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os11g11770 No alias disease resistance protein RPM1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g45330 No alias disease resistance protein RPM1, putative, expressed 0.03 Orthogroups_2024-Update
Potri.003G220600 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
Potri.005G008700 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.005G034900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.005G035400 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.005G035700 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.018G013500 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Sobic.010G017300.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g009660 No alias LOW QUALITY:Nbs-lrr resistance protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc10g047320 No alias Disease resistance protein (CC-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
Sopen02g010610 No alias NB-ARC domain 0.03 Orthogroups_2024-Update
Sopen11g027730 No alias NB-ARC domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 177 339
No external refs found!