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LOC_Os11g12480


Description : OsFBL54 - F-box domain and LRR containing protein, expressed


Gene families : OG_42_0000187 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g12480
Cluster HCCA clusters: cluster_0124

Target Alias Description ECC score Gene Family Method Actions
Bradi3g60240 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g23238 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G080050.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g12990 No alias OsFBX122 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g36020 No alias OsFBX138 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g09920 No alias OsFBX277 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g03760 No alias OsFBX350 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.3G401900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G031700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G299300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G162401.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 21 59
No external refs found!