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  5. LOC_Os11g13440

LOC_Os11g13440


Description : RGH1A, putative, expressed


Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g13440
Cluster HCCA clusters: cluster_0033

Target Alias Description ECC score Gene Family Method Actions
A4A49_07855 No alias putative late blight resistance protein-like r1b-12 0.02 Orthogroups_2024-Update
A4A49_41267 No alias disease resistance protein rpp13 0.02 Orthogroups_2024-Update
Brara.I01608.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01662.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.18G082800 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.18G088950 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G001570.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G246300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G064900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G088200.1 No alias DLSV protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.9G374900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g070750 No alias No description available 0.03 Orthogroups_2024-Update
Sopen10g017600 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 182 425
No external refs found!