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  5. Solyc09g007290

Solyc09g007290


Description : Nuclear transcription factor Y subunit B (AHRD V3.3 *** G7L1Q2_MEDTR)


Gene families : OG_42_0000232 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000232_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g007290
Cluster HCCA clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Bradi1g60030 No alias nuclear factor Y, subunit B3 0.03 Orthogroups_2024-Update
Bradi2g22940 No alias nuclear factor Y, subunit B8 0.02 Orthogroups_2024-Update
Brara.I03626.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
Glyma.10G192000 No alias nuclear factor Y, subunit B8 0.04 Orthogroups_2024-Update
LOC_Os01g61810 No alias histone-like transcription factor and archaeal histone,... 0.02 Orthogroups_2024-Update
Potri.016G005600 No alias nuclear factor Y, subunit B6 0.03 Orthogroups_2024-Update
Pp1s302_35V6 No alias ccaat-binding transcription factor subunit 0.03 Orthogroups_2024-Update
Sopen00g008690 No alias Histone-like transcription factor (CBF/NF-Y) and archaeal histone 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 38 102
No external refs found!