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  5. Solyc09g007420

Solyc09g007420


Description : Glycosyltransferase (AHRD V3.3 *** I1Z1X6_TOBAC)


Gene families : OG_42_0007236 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g007420
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Brara.E00790.1 No alias xylosyltransferase *(IRX9) & EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
GRMZM2G012874 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os05g03174 No alias glycosyltransferase family 43 protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.006G131000 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.04 Orthogroups_2024-Update
Potri.016G086400 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005027 Glyco_trans_43 171 374
No external refs found!