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  5. LOC_Os11g24840

LOC_Os11g24840


Description : ankyrin repeat family protein, putative, expressed


Gene families : OG_42_0000140 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g24840
Cluster HCCA clusters: cluster_0141

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G294100 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G007250.14 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os05g35310 No alias ankyrin repeat family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g32040 No alias conserved hypothetical protein 0.02 Orthogroups_2024-Update
LOC_Os11g14260 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.010G077500 No alias Function unknown 0.02 Orthogroups_2024-Update
Potri.019G115300 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Seita.8G059800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G179000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G208500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G179400.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 207 312
IPR020683 Ankyrin_rpt-contain_dom 59 148
No external refs found!