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  5. LOC_Os11g29330

LOC_Os11g29330


Description : retrotransposon protein, putative, Ty1-copia subclass, expressed


Gene families : OG_42_0000948 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000948_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g29330
Cluster HCCA clusters: cluster_0122


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
CC GO:0005885 Arp2/3 protein complex IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006480 N-terminal protein amino acid methylation IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0007015 actin filament organization IEP Predicted GO
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0010638 positive regulation of organelle organization IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0030832 regulation of actin filament length IEP Predicted GO
BP GO:0030833 regulation of actin filament polymerization IEP Predicted GO
BP GO:0030838 positive regulation of actin filament polymerization IEP Predicted GO
BP GO:0031334 positive regulation of protein complex assembly IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
BP GO:0032271 regulation of protein polymerization IEP Predicted GO
BP GO:0032273 positive regulation of protein polymerization IEP Predicted GO
BP GO:0032535 regulation of cellular component size IEP Predicted GO
BP GO:0032956 regulation of actin cytoskeleton organization IEP Predicted GO
BP GO:0032970 regulation of actin filament-based process IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043254 regulation of protein complex assembly IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
BP GO:0044089 positive regulation of cellular component biogenesis IEP Predicted GO
BP GO:0045010 actin nucleation IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051493 regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051495 positive regulation of cytoskeleton organization IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0090066 regulation of anatomical structure size IEP Predicted GO
BP GO:0097435 supramolecular fiber organization IEP Predicted GO
BP GO:0110053 regulation of actin filament organization IEP Predicted GO
BP GO:1902903 regulation of supramolecular fiber organization IEP Predicted GO
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!