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  5. LOC_Os11g32270

LOC_Os11g32270


Description : N-rich protein, putative, expressed


Gene families : OG_42_0000361 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000361_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g32270
Cluster HCCA clusters: cluster_0027

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G024460.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G075780.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G075800.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G137800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G058100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc10g076340 No alias Kelch repeat-containing family protein (AHRD V3.3 *-*... 0.01 Orthogroups_2024-Update
Sopen02g038760 No alias Development and cell death domain 0.02 Orthogroups_2024-Update
Sopen06g032670 No alias Development and cell death domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 46 167
IPR013989 Dev_and_cell_death_domain 243 364
No external refs found!