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LOC_Os11g34940


Description : plastid-specific 50S ribosomal protein 6, chloroplast precursor, putative, expressed


Gene families : OG_42_0009107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g34940
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
Kfl00714_0010 kfl00714_0010_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Pp1s74_226V6 No alias MVA3.3; plastid-specific ribosomal protein 6 precursor... 0.03 Orthogroups_2024-Update
Sopen04g030750 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
CC GO:0009507 chloroplast IEA InterProScan predictions
MF GO:0019843 rRNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR020526 Ribosomal_L6_chp 35 92
No external refs found!