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  5. Solyc09g008430

Solyc09g008430


Description : CHY zinc finger family protein, expressed (AHRD V3.3 *** Q337P1_ORYSJ)


Gene families : OG_42_0001040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g008430
Cluster HCCA clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
A4A49_37370 No alias e3 ubiquitin-protein ligase miel1 0.02 Orthogroups_2024-Update
At5g18650 No alias MIEL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UJV2] 0.03 Orthogroups_2024-Update
At5g22920 No alias E3 ubiquitin-protein ligase RZFP34... 0.03 Orthogroups_2024-Update
GRMZM2G144782 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G038120.1 No alias E3 ubiquitin ligase *(CHY) 0.05 Orthogroups_2024-Update
MA_126866g0010 No alias (at5g25560 : 439.0) CHY-type/CTCHY-type/RING-type Zinc... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 82 116
No external refs found!