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LOC_Os11g37060


Description : OsFBDUF52 - F-box and DUF domain containing protein, expressed


Gene families : OG_42_0000263 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g37060
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
Bradi4g14714 No alias Protein of unknown function (DUF295) 0.03 Orthogroups_2024-Update
LOC_Os03g58764 No alias OsFBDUF18 - F-box and DUF domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g05709 No alias F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.002G015700 No alias F-box family protein with a domain of unknown function (DUF295) 0.02 Orthogroups_2024-Update
Solyc02g092020 No alias F-box protein SKIP23 (AHRD V3.3 *** A0A151TCP0_CAJCA) 0.03 Orthogroups_2024-Update
Solyc03g115420 No alias F-box family protein (AHRD V3.3 *** B9H429_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005174 DUF295 319 377
IPR001810 F-box_dom 2 33
No external refs found!