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  5. LOC_Os11g39990

LOC_Os11g39990


Description : patatin, putative, expressed


Gene families : OG_42_0000167 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g39990
Cluster HCCA clusters: cluster_0104

Target Alias Description ECC score Gene Family Method Actions
231548 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
GRMZM2G154523 No alias phospholipase A 2A 0.04 Orthogroups_2024-Update
HORVU5Hr1G119820.1 No alias phospholipase-A2 *(pPLA2-II)) 0.02 Orthogroups_2024-Update
MA_468579g0010 No alias (at4g37050 : 338.0) Patatin-related phospholipase A.... 0.03 Orthogroups_2024-Update
Potri.002G128000 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
Pp1s141_142V6 No alias patatin t5 0.01 Orthogroups_2024-Update
Sobic.005G186400.1 No alias phospholipase-A2 *(pPLA2-II)) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 35 243
No external refs found!