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  5. Solyc01g090650

Solyc01g090650


No description available


Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g090650
Cluster HCCA clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Brara.A03677.1 No alias SMARCA component *(SYD/BRM/MINU) 0.03 Orthogroups_2024-Update
Glyma.07G252100 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Glyma.10G250500 No alias Homeotic gene regulator 0.03 Orthogroups_2024-Update
HORVU3Hr1G012850.1 No alias ATPase component *(CHR11/CHR17) of ISWI chromatin... 0.03 Orthogroups_2024-Update
LOC_Os05g05780 No alias chromatin-remodeling complex ATPase chain, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G110100 No alias chromatin remodeling 4 0.02 Orthogroups_2024-Update
Sopen08g010020 No alias SNF2 family N-terminal domain 0.04 Orthogroups_2024-Update
evm.model.tig00000128.11 No alias (at5g18620 : 692.0) chromatin remodeling factor17... 0.01 Orthogroups_2024-Update
evm.model.tig00000350.9 No alias (at2g25170 : 212.0) Encodes a SWI/SWF nuclear-localized... 0.01 Orthogroups_2024-Update
evm.model.tig00000989.25 No alias (at4g31900 : 159.0) PICKLE RELATED 2 (PKR2); FUNCTIONS... 0.01 Orthogroups_2024-Update
evm.model.tig00020825.19 No alias (at2g13370 : 429.0) chromatin remodeling 5 (CHR5);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!