- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : LOW QUALITY:AMP-dependent synthetase and ligase family protein (AHRD V3.3 --* AT2G47240.4)
Gene families : OG_42_0003548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003548_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc09g009420 | |
| Cluster | HCCA clusters: Cluster_95 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_02207 | No alias | hypothetical protein | 0.07 | Orthogroups_2024-Update | |
| At3g44450 | No alias | Protein BIC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M280] | 0.05 | Orthogroups_2024-Update | |
| Brara.D00576.1 | No alias | regulatory protein *(BIC) of cryptochrome signalling | 0.03 | Orthogroups_2024-Update | |
| Brara.F01958.1 | No alias | regulatory protein *(BIC) of cryptochrome signalling | 0.06 | Orthogroups_2024-Update | |
| Brara.I03577.1 | No alias | regulatory protein *(BIC) of cryptochrome signalling | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G157120 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| Kfl00139_0340 | kfl00139_0340_v1.1 | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| Potri.009G163900 | No alias | Function unknown | 0.02 | Orthogroups_2024-Update | |
| Pp1s5_398V6 | No alias | T22K7.130; expressed protein [Arabidopsis thaliana] | 0.02 | Orthogroups_2024-Update | |
| Pp1s74_133V6 | No alias | T22K7.130; expressed protein [Arabidopsis thaliana] | 0.03 | Orthogroups_2024-Update | |
| Seita.7G090200.1 | No alias | regulatory protein *(BIC) of cryptochrome signalling | 0.05 | Orthogroups_2024-Update | |
| Sobic.004G165500.1 | No alias | regulatory protein *(BIC) of cryptochrome signalling | 0.03 | Orthogroups_2024-Update | |
| Sopen09g004160 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | Predicted GO |
| MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | Predicted GO |
| MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
| MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0006006 | glucose metabolic process | IEP | Predicted GO |
| BP | GO:0006094 | gluconeogenesis | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
| CC | GO:0009521 | photosystem | IEP | Predicted GO |
| CC | GO:0009522 | photosystem I | IEP | Predicted GO |
| CC | GO:0009538 | photosystem I reaction center | IEP | Predicted GO |
| BP | GO:0009690 | cytokinin metabolic process | IEP | Predicted GO |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Predicted GO |
| BP | GO:0010817 | regulation of hormone levels | IEP | Predicted GO |
| BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Predicted GO |
| MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predicted GO |
| MF | GO:0017048 | Rho GTPase binding | IEP | Predicted GO |
| MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Predicted GO |
| BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Predicted GO |
| MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| BP | GO:0034754 | cellular hormone metabolic process | IEP | Predicted GO |
| BP | GO:0042445 | hormone metabolic process | IEP | Predicted GO |
| BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
| CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Predicted GO |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
| MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Predicted GO |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
| BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
| MF | GO:0071949 | FAD binding | IEP | Predicted GO |
| CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |