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Description : expressed protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os11g45410 | |
| Cluster | HCCA clusters: cluster_0059 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 123298 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi1g00381 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi2g11440 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g29450 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | Orthogroups_2024-Update | |
| GRMZM2G076257 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G096602 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
| HORVU4Hr1G021240.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G047290.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU7Hr1G114390.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g32620 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os03g60690 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os04g02850 | No alias | pentatricopeptide, putative, expressed | 0.05 | Orthogroups_2024-Update | |
| Seita.1G215700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.5G124400.1 | No alias | RNA editing factor *(OTP81) | 0.03 | Orthogroups_2024-Update | |
| Seita.5G357300.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.7G277600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.9G015400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.9G355700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G403500.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc09g092150 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004177 | aminopeptidase activity | IEP | Predicted GO |
| MF | GO:0005507 | copper ion binding | IEP | Predicted GO |
| MF | GO:0008238 | exopeptidase activity | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 8 | 37 |
| IPR002885 | Pentatricopeptide_repeat | 285 | 311 |
| IPR002885 | Pentatricopeptide_repeat | 516 | 545 |
| IPR002885 | Pentatricopeptide_repeat | 386 | 411 |
| IPR002885 | Pentatricopeptide_repeat | 184 | 209 |
| IPR002885 | Pentatricopeptide_repeat | 588 | 607 |
| IPR002885 | Pentatricopeptide_repeat | 488 | 514 |
| IPR002885 | Pentatricopeptide_repeat | 313 | 336 |
| IPR032867 | DYW_dom | 789 | 874 |
| IPR002885 | Pentatricopeptide_repeat | 108 | 155 |
| IPR002885 | Pentatricopeptide_repeat | 210 | 257 |
| IPR002885 | Pentatricopeptide_repeat | 412 | 450 |
| IPR002885 | Pentatricopeptide_repeat | 618 | 662 |
| No external refs found! |