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  5. Solyc09g009590

Solyc09g009590


Description : A20/AN1 zinc finger protein


Gene families : OG_42_0000255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g009590
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G050270.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G232000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G203700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen01g033950 No alias AN1-like Zinc finger 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002653 Znf_A20 16 39
IPR000058 Znf_AN1 94 128
No external refs found!