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  5. LOC_Os11g47690

LOC_Os11g47690


Description : zinc finger, C3HC4 type domain containing protein, expressed


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g47690
Cluster HCCA clusters: cluster_0104

Target Alias Description ECC score Gene Family Method Actions
A4A49_16075 No alias ring-h2 finger protein atl67 0.02 Orthogroups_2024-Update
A4A49_36993 No alias ring-h2 finger protein atl52 0.03 Orthogroups_2024-Update
At4g35480 No alias RHA3B [Source:UniProtKB/TrEMBL;Acc:A0A178UXS9] 0.02 Orthogroups_2024-Update
Brara.C03025.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.E01533.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU3Hr1G081150.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G082740.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G064700.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 100 143
No external refs found!