LOC_Os12g01530

Description : ferritin-1, chloroplast precursor, putative, expressed

Gene families : OG_42_0002180 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002180_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os12g01530
Cluster	HCCA clusters: cluster_0010

Target	Alias	Description	ECC score	Gene Family Method
82847	No alias	ferritin 4	0.02	Orthogroups_2024-Update
Brara.C00023.1	No alias	iron storage protein *(FER) & EC_1.16 oxidoreductase...	0.02	Orthogroups_2024-Update
Glyma.01G124500	No alias	ferretin 1	0.02	Orthogroups_2024-Update
Glyma.02G262500	No alias	ferritin 4	0.03	Orthogroups_2024-Update
Glyma.11G232600	No alias	ferritin 4	0.04	Orthogroups_2024-Update
Glyma.18G024600	No alias	ferritin 4	0.03	Orthogroups_2024-Update
Mp1g29100.1	No alias	non-haem ferritin	0.02	Orthogroups_2024-Update
Potri.016G124900	No alias	ferretin 1	0.04	Orthogroups_2024-Update
Pp1s126_186V6	No alias	iron-binding protein	0.02	Orthogroups_2024-Update
Pp1s59_356V6	No alias	iron-binding protein	0.02	Orthogroups_2024-Update
Seita.7G331800.1	No alias	iron storage protein *(FER) & EC_1.16 oxidoreductase...	0.02	Orthogroups_2024-Update
Sobic.008G004800.1	No alias	iron storage protein *(FER) & EC_1.16 oxidoreductase...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	None	Extended
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0006879	cellular iron ion homeostasis	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008199	ferric iron binding	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0030003	cellular cation homeostasis	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0046916	cellular transition metal ion homeostasis	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055072	iron ion homeostasis	None	Extended
BP	GO:0055076	transition metal ion homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	Predicted GO
MF	GO:0004451	isocitrate lyase activity	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006788	heme oxidation	IEP	Predicted GO
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predicted GO
BP	GO:0009119	ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Predicted GO
MF	GO:0016833	oxo-acid-lyase activity	IEP	Predicted GO
MF	GO:0016851	magnesium chelatase activity	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
BP	GO:0019321	pentose metabolic process	IEP	Predicted GO
BP	GO:0019566	arabinose metabolic process	IEP	Predicted GO
CC	GO:0031012	extracellular matrix	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
CC	GO:0034357	photosynthetic membrane	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
BP	GO:0042168	heme metabolic process	IEP	Predicted GO
BP	GO:0042278	purine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0042440	pigment metabolic process	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
CC	GO:0042651	thylakoid membrane	IEP	Predicted GO
CC	GO:0044421	extracellular region part	IEP	Predicted GO
BP	GO:0045454	cell redox homeostasis	IEP	Predicted GO
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0046373	L-arabinose metabolic process	IEP	Predicted GO
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	Predicted GO
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO
MF	GO:0051743	red chlorophyll catabolite reductase activity	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR008331	Ferritin_DPS_dom	93	224

External Links

No external refs found!

LOC_Os12g01530

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation