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  5. Solyc09g009720

Solyc09g009720


Description : ubiquitin-conjugating enzyme E2 (AHRD V3.3 *** AT5G59300.1)


Gene families : OG_42_0002092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g009720
Cluster HCCA clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G072200.2 No alias E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 Orthogroups_2024-Update
LOC_Os05g38550 No alias ubiquitin-conjugating enzyme, putative, expressed 0.02 Orthogroups_2024-Update
Mp4g07670.1 No alias component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 Orthogroups_2024-Update
Seita.5G375700.1 No alias E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 10 159
No external refs found!