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  5. LOC_Os12g01730

LOC_Os12g01730


Description : laccase-23 precursor, putative, expressed


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g01730
Cluster HCCA clusters: cluster_0141

Target Alias Description ECC score Gene Family Method Actions
A4A49_13107 No alias laccase-14 0.02 Orthogroups_2024-Update
A4A49_21564 No alias laccase-15 0.02 Orthogroups_2024-Update
Bradi3g59210 No alias laccase 14 0.02 Orthogroups_2024-Update
Brara.E01299.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Glyma.02G224800 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Glyma.18G183700 No alias laccase 17 0.02 Orthogroups_2024-Update
Glyma.18G193400 No alias Laccase/Diphenol oxidase family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G008360.2 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
HORVU3Hr1G088140.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
HORVU3Hr1G088150.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Seita.8G252500.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_3 32 144
IPR001117 Cu-oxidase 161 309
IPR011706 Cu-oxidase_2 416 549
No external refs found!