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  5. LOC_Os12g02520

LOC_Os12g02520


Description : OsMan09 - Endo-Beta-Mannanase, expressed


Gene families : OG_42_0000309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g02520
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
Brara.G01259.1 No alias endo-beta-1,4-mannanase 0.03 Orthogroups_2024-Update
Glyma.06G292400 No alias Glycosyl hydrolase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G224500 No alias Glycosyl hydrolase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G071300 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G113400 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
MA_111906g0010 No alias (at5g66460 : 457.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
MA_69814g0010 No alias (at5g66460 : 437.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
MA_955078g0010 No alias (at5g66460 : 462.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
PSME_00033748-RA No alias (at5g66460 : 455.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
PSME_00047131-RA No alias (at5g66460 : 457.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
Potri.005G120500 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
Pp1s23_181V6 No alias contains ESTs AU093960(E1432),C72325(E1432) [Oryza... 0.02 Orthogroups_2024-Update
Pp1s5_225V6 No alias hydrolyzing o-glycosyl 0.02 Orthogroups_2024-Update
Solyc12g013770 No alias Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** MAN1_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 11 306
No external refs found!